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easyspin matlab routine  (MathWorks Inc)


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    MathWorks Inc easyspin matlab routine
    Easyspin Matlab Routine, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/matlab+easyspin+routine/10__1016_slash_j__inoche__2024__113670-62-6-8
    Average 90 stars, based on 1 article reviews
    easyspin matlab routine - by Bioz Stars, 2026-11
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    Article Title: I 2 BODIPY as a new photoswitchable spin label for light-induced pulsed EPR dipolar spectroscopy exploiting magnetophotoselection
    Article Snippet: The spin Hamiltonian parameters used to simulate the EPR spectrum of the nitroxide radical were obtained from fitting the echo-detected field-swept spectrum (Fig. 2 (a)), using the Matlab® EasySpin routine (pepper function).

    Article Title: Determining and controlling conformational information from orientationally selective light-induced triplet–triplet electron resonance spectroscopy for a set of bis-porphyrin rulers
    Article Snippet: Figure S2. trESR spectrum of [3] at 20 K measured after laser flash (black) and simulation (red) using the Matlab® EasySpin routine (pepper function)1 with the following spin Hamiltonian parameters: D = 1165 MHz, E = -235 MHz, D-strain = 60 MHz, E-strain = 0 MHz, g = 2.007, lw = 0.7 mT and triplet state sublevel populations px = 0.32, py = 0.46 and pz = 0.23.

    Electron Paramagnetic Resonance:

    Article Title: Direct Comparison between Förster Resonance Energy Transfer and Light-Induced Triplet-Triplet Electron Resonance Spectroscopy.
    Article Snippet: .. Spectra were simulated using the Matlab EasySpin routine (pepper function).4 Light-induced pulsed ESR characterization (i.e. field sweeps, phase-memory time and delayafter-flash experiments) were performed in an over-coupled resonator using a standard Hahnecho sequence preceded by a laser flash (laser 1 – DAF – π/2 – τ – π – τ – echo), with rectangular 16-32 ns π/2- π pulses and a τ value of 320 ns. ..

    Sequencing:

    Article Title: Direct Comparison between Förster Resonance Energy Transfer and Light-Induced Triplet-Triplet Electron Resonance Spectroscopy.
    Article Snippet: .. Spectra were simulated using the Matlab EasySpin routine (pepper function).4 Light-induced pulsed ESR characterization (i.e. field sweeps, phase-memory time and delayafter-flash experiments) were performed in an over-coupled resonator using a standard Hahnecho sequence preceded by a laser flash (laser 1 – DAF – π/2 – τ – π – τ – echo), with rectangular 16-32 ns π/2- π pulses and a τ value of 320 ns. ..

    Electrical Source Imaging:

    Article Title: Determining and controlling conformational information from orientationally selective light-induced triplet–triplet electron resonance spectroscopy for a set of bis-porphyrin rulers
    Article Snippet: .. The spin Hamiltonian parameters for the molecule were extracted via simulation of the field-swept spectrum (Fig. S2, ESI ) using the Matlab EasySpin routine (pepper function). ..



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    MathWorks Inc easyspin matlab routine
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    MathWorks Inc matlab® easyspin routine (pepper function)
    Orientational DEER study of Cu 2 -[3] at Q-band. (a) Echo-detected field-swept ESR spectrum (black) and simulation (red) using the Matlab® <t>EasySpin</t> routine (pepper function), with spin Hamiltonian parameters: g = [2.041, 2.051, 2.191], A 65 Cu = [72, 89, 639] MHz and l w = [2, 2] mT. The field positions used to record the DEER traces are indicated with vertical lines. (b) Background-corrected and modulation depth-normalised DEER traces acquired at the different field positions (colour) and corresponding orientation-dependent fits (black). Modulation depths were ∼2–3% before normalization in all cases. (c) Distance distributions obtained from the orientation-dependent analysis of the DEER (black) and LITTER (red) datasets. In each case the center-to-center distribution of distances are plotted as dashed lines and the point dipole distribution of distance distribution calculated from pairwise distances of atoms possessing spin density on different chromophores is shown as a solid line. (d) DFT-optimised geometry showing the different positions of the CuTPP centre most contributing to the fit as gey spheres, relative to the g -tensor frame of the other CuTPP (arrows: red = g x , green = g y , blue = g z ). The diameter of the spheres is proportional to the number of times a single conformation contributes to the complete fit shown in panel (b). A rotated view is provided in Fig. S11 (ESI ). The TPP centre positions from have been included for comparison (red).
    Matlab® Easyspin Routine (Pepper Function), supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Orientational DEER study of Cu 2 -[3] at Q-band. (a) Echo-detected field-swept ESR spectrum (black) and simulation (red) using the Matlab® <t>EasySpin</t> routine (pepper function), with spin Hamiltonian parameters: g = [2.041, 2.051, 2.191], A 65 Cu = [72, 89, 639] MHz and l w = [2, 2] mT. The field positions used to record the DEER traces are indicated with vertical lines. (b) Background-corrected and modulation depth-normalised DEER traces acquired at the different field positions (colour) and corresponding orientation-dependent fits (black). Modulation depths were ∼2–3% before normalization in all cases. (c) Distance distributions obtained from the orientation-dependent analysis of the DEER (black) and LITTER (red) datasets. In each case the center-to-center distribution of distances are plotted as dashed lines and the point dipole distribution of distance distribution calculated from pairwise distances of atoms possessing spin density on different chromophores is shown as a solid line. (d) DFT-optimised geometry showing the different positions of the CuTPP centre most contributing to the fit as gey spheres, relative to the g -tensor frame of the other CuTPP (arrows: red = g x , green = g y , blue = g z ). The diameter of the spheres is proportional to the number of times a single conformation contributes to the complete fit shown in panel (b). A rotated view is provided in Fig. S11 (ESI ). The TPP centre positions from have been included for comparison (red).
    Easyspin Routine Of Matlab Software, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    MathWorks Inc easyspin routine in matlab software
    Orientational DEER study of Cu 2 -[3] at Q-band. (a) Echo-detected field-swept ESR spectrum (black) and simulation (red) using the Matlab® <t>EasySpin</t> routine (pepper function), with spin Hamiltonian parameters: g = [2.041, 2.051, 2.191], A 65 Cu = [72, 89, 639] MHz and l w = [2, 2] mT. The field positions used to record the DEER traces are indicated with vertical lines. (b) Background-corrected and modulation depth-normalised DEER traces acquired at the different field positions (colour) and corresponding orientation-dependent fits (black). Modulation depths were ∼2–3% before normalization in all cases. (c) Distance distributions obtained from the orientation-dependent analysis of the DEER (black) and LITTER (red) datasets. In each case the center-to-center distribution of distances are plotted as dashed lines and the point dipole distribution of distance distribution calculated from pairwise distances of atoms possessing spin density on different chromophores is shown as a solid line. (d) DFT-optimised geometry showing the different positions of the CuTPP centre most contributing to the fit as gey spheres, relative to the g -tensor frame of the other CuTPP (arrows: red = g x , green = g y , blue = g z ). The diameter of the spheres is proportional to the number of times a single conformation contributes to the complete fit shown in panel (b). A rotated view is provided in Fig. S11 (ESI ). The TPP centre positions from have been included for comparison (red).
    Easyspin Routine In Matlab Software, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/matlab+easyspin+routine/10__1021_slash_acs__iecr__2c01522-95-1-4
    Average 90 stars, based on 1 article reviews
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    Orientational DEER study of Cu 2 -[3] at Q-band. (a) Echo-detected field-swept ESR spectrum (black) and simulation (red) using the Matlab® EasySpin routine (pepper function), with spin Hamiltonian parameters: g = [2.041, 2.051, 2.191], A 65 Cu = [72, 89, 639] MHz and l w = [2, 2] mT. The field positions used to record the DEER traces are indicated with vertical lines. (b) Background-corrected and modulation depth-normalised DEER traces acquired at the different field positions (colour) and corresponding orientation-dependent fits (black). Modulation depths were ∼2–3% before normalization in all cases. (c) Distance distributions obtained from the orientation-dependent analysis of the DEER (black) and LITTER (red) datasets. In each case the center-to-center distribution of distances are plotted as dashed lines and the point dipole distribution of distance distribution calculated from pairwise distances of atoms possessing spin density on different chromophores is shown as a solid line. (d) DFT-optimised geometry showing the different positions of the CuTPP centre most contributing to the fit as gey spheres, relative to the g -tensor frame of the other CuTPP (arrows: red = g x , green = g y , blue = g z ). The diameter of the spheres is proportional to the number of times a single conformation contributes to the complete fit shown in panel (b). A rotated view is provided in Fig. S11 (ESI ). The TPP centre positions from have been included for comparison (red).

    Journal: Physical Chemistry Chemical Physics

    Article Title: Determining and controlling conformational information from orientationally selective light-induced triplet–triplet electron resonance spectroscopy for a set of bis-porphyrin rulers †

    doi: 10.1039/d3cp03454b

    Figure Lengend Snippet: Orientational DEER study of Cu 2 -[3] at Q-band. (a) Echo-detected field-swept ESR spectrum (black) and simulation (red) using the Matlab® EasySpin routine (pepper function), with spin Hamiltonian parameters: g = [2.041, 2.051, 2.191], A 65 Cu = [72, 89, 639] MHz and l w = [2, 2] mT. The field positions used to record the DEER traces are indicated with vertical lines. (b) Background-corrected and modulation depth-normalised DEER traces acquired at the different field positions (colour) and corresponding orientation-dependent fits (black). Modulation depths were ∼2–3% before normalization in all cases. (c) Distance distributions obtained from the orientation-dependent analysis of the DEER (black) and LITTER (red) datasets. In each case the center-to-center distribution of distances are plotted as dashed lines and the point dipole distribution of distance distribution calculated from pairwise distances of atoms possessing spin density on different chromophores is shown as a solid line. (d) DFT-optimised geometry showing the different positions of the CuTPP centre most contributing to the fit as gey spheres, relative to the g -tensor frame of the other CuTPP (arrows: red = g x , green = g y , blue = g z ). The diameter of the spheres is proportional to the number of times a single conformation contributes to the complete fit shown in panel (b). A rotated view is provided in Fig. S11 (ESI ). The TPP centre positions from have been included for comparison (red).

    Article Snippet: As input to this PDS simulation algorithm, the spin system parameters were obtained from fitting trESR or echo-detected field sweep datasets (Fig. S2, ESI and ) using a Matlab® EasySpin routine (pepper function).

    Techniques: Comparison